Publications

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. BioVar: an online biological variation analysis tool. Turkish Journal of Biochemistry 45(5), 2020.

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. Quantitative Assessment of Salivary Gland Parenchymal Vascularization Using Power Doppler Ultrasound and Superb Microvascular Imaging: A Potential Tool in the Diagnosis of Sjögren’s Syndrome. Balkan Med J 37:203-7, 2020.

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. Deep Learning-Based Imbalanced Data Classification for Drug Discovery. J. Chem. Inf. Model. 60, 9, 4180–4190, 2020.

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. The Evaluation of the Distribution of CD133, CXCR1 and the Tumor Associated Macrophages in Different Molecular Subtypes of Breast Cancer. Histology and histopathology 35(1):83-96, 2020.

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. Cardiac Magnetic Resonance Imaging and Transthoracic Echocardiography: Investigation of Concordance between the Two Methods for Measurement of the Cardiac Chamber. Medicina 55(6):260, 2019.

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. Biological variation of peripheral blood T-lymphocytes. Journal of immunological methods, 2019.

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. The Effect of Thyroid Stimulating Hormone Level Within the Reference Range on In-Hospital and Short-Term Prognosis in Acute Coronary Syndrome Patients. Medicina 55(5):175, 2019.

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. MLSeq: Machine learning interface for RNA sequencing data. Computer Methods and Programs in Biomedicine, 2019.

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. Small Drug Molecule Classification Using Deep Neural Networks. Turkiye Klinikleri J Biostat, 2019.

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. Can myometrial thickness/cervical length ratio predict preterm delivery in singleton pregnancies with threatened preterm labor? A prospective study. Archives of gynecology and obstetrics, 2019.

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. The Relationship Between Diffusion-Weighted Magnetic Resonance Imaging Lesions and 24-Hour Rhythm Holter Findings in Patients With Cryptogenic Stroke. Medicina 2019, 55(2), 38., 2019.

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. Machine learning based classification of cells into chronological stages using single-cell transcriptomics. Scientific Reports, 8:17156, DOI:10.1038/s41598-018-35218-5, 2018.

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. The Relationship Between Blood Pressure and Sleep Duration in Turkish Children: A Cross-Sectional Study. Journal of clinical research in pediatric endocrinology, 10(1), 51, 2018.

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. Investigation of Protein Quaternary Structure via Stoichiometry and Symmetry Information. PLoS ONE 13(6): e0197176, 2018.

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. Retinal ganglion cell complex and peripapillary retinal nerve fiber layer thicknesses following carotid endarterectomy. International Ophthalmology, 1-9, 2018.

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. Biological variation estimates of prothrombin time, activated partial thromboplastin time, and fibrinogen in 28 healthy individuals.. Int J Lab Hem. 2018;00:1–5, 2018.

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. voomDDA: discovery of diagnostic biomarkers and classification of RNA-seq data. PeerJ, 5, e3890, 2017.

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. geneSurv: An interactive web-based tool for survival analysis in genomics research. Computers in Biology and Medicine 89 (2017): 487-496, 2017.

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. A comprehensive simulation study on classification of RNA-Seq data. PLoS ONE 12(8): e0182507, 2017.

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. easyROC: an interactive web-tool for ROC curve analysis using R language environment. The R Journal, 8(213), 2016, 2016.

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. Statistical learning approaches in diagnosing patients with nontraumatic acute abdomen. Turkish Journal of Electrical Engineering & Computer Sciences, 24(5), 3685-3697, 2016.

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. MLViS: A Web Tool for Machine Learning-Based Virtual Screening in Early-Phase of Drug Discovery and Development. PLoS ONE 10(4): e0124600, 2015.

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. MVN: An R Package for Assessing Multivariate Normality. The R Journal 6.2 (2014): 151-162, 2014.

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. Drug/nondrug classification using Support Vector Machines with various feature selection strategies. Computer Methods and Programs in Biomedicine, 117(2), 51-60, 2014.

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. Comparison of efficacy between low-fluence and half-dose verteporfin photodynamic therapy for chronic central serous chorioretinopathy. Clinical Ophthalmology (Auckland, NZ), 8, 685, 2014.

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